Colin Studholme

François Rousseau, Estanislao Oubel, Julien Pontabry, Marc Schweitzer, Colin Studholme, Meriam Koob, Jean-Louis Dietemann: BTK: An open-source toolkit for fetal brain MR image processing. Computer Methods and Programs in Biomedicine 109(1): 65-73 (2013)

Julien Pontabry, F. Rousseau, Estanislao Oubel, Colin Studholme, Meriam Koob, Jean-Louis Dietemann: Probabilistic tractography using Q-ball imaging and particle filtering: Application to adult and in-utero fetal brain studies. Medical Image Analysis 17(3): 297-310 (2013)

Estanislao Oubel, Meriam Koob, Colin Studholme, Jean-Louis Dietemann, François Rousseau: Reconstruction of scattered data in fetal diffusion MRI. Medical Image Analysis 16(1): 28-37 (2012)

Vidya Rajagopalan, Julia Scott, Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme: Mapping directionality specific volume changes using tensor based morphometry: An application to the study of gyrogenesis and lateralization of the human fetal brain. NeuroImage 63(2): 947-958 (2012)

Colin Studholme: Fetal brain mapping. ISBI 2012: 495-498

Benoît Caldairou, Nicolas Passat, Piotr A. Habas, Colin Studholme, François Rousseau: A non-local fuzzy segmentation method: Application to brain MRI. Pattern Recognition 44(9): 1916-1927 (2011)

Kio Kim, Piotr A. Habas, Vidya Rajagopalan, Julia Scott, James M. Corbett-Detig, François Rousseau, A. James Barkovich, Orit A. Glenn, Colin Studholme: Bias Field Inconsistency Correction of Motion-Scattered Multislice MRI for Improved 3D Image Reconstruction. IEEE Trans. Med. Imaging 30(9): 1704-1712 (2011)

François Rousseau, Piotr A. Habas, Colin Studholme: A Supervised Patch-Based Approach for Human Brain Labeling. IEEE Trans. Med. Imaging 30(10): 1852-1862 (2011)

Benoît Caldairou, Nicolas Passat, Piotr A. Habas, Colin Studholme, Meriam Koob, Jean-Louis Dietemann, François Rousseau: Data-Driven Cortex Segmentation in Reconstructed Fetal MRI by Using Structural Constraints. CAIP (1) 2011: 503-511

François Rousseau, Piotr A. Habas, Colin Studholme: Human brain labeling using image similarities. CVPR 2011: 1081-1088

Benoît Caldairou, Nicolas Passat, Piotr A. Habas, Colin Studholme, Meriam Koob, Jean-Louis Dietemann, François Rousseau: Segmentation of the cortex in fetal MRI using a topological model. ISBI 2011: 2045-2048

Vidya Rajagopalan, Julia Scott, Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme: Spatiotemporal Morphometry of Adjacent Tissue Layers with Application to the Study of Sulcal Formation. MICCAI (2) 2011: 476-483

Piotr A. Habas, Kio Kim, James M. Corbett-Detig, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme: A spatiotemporal atlas of MR intensity, tissue probability and shape of the fetal brain with application to segmentation. NeuroImage 53(2): 460-470 (2010)

Kio Kim, Piotr A. Habas, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme: Intersection Based Motion Correction of Multislice MRI for 3-D in Utero Fetal Brain Image Formation. IEEE Trans. Med. Imaging 29(1): 146-158 (2010)

François Rousseau, Kio Kim, Colin Studholme: A groupwise super-resolution approach: application to brain MRI. ISBI 2010: 860-863

Vidya Rajagopalan, Julia Scott, Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme: Measures for Characterizing Directionality Specific Volume Changes in TBM of Brain Growth. MICCAI (2) 2010: 339-346

François Rousseau, Kio Kim, Colin Studholme, Meriam Koob, Jean-Louis Dietemann: On Super-Resolution for Fetal Brain MRI. MICCAI (2) 2010: 355-362

Estanislao Oubel, Meriam Koob, Colin Studholme, Jean-Louis Dietemann, François Rousseau: Reconstruction of Scattered Data in Fetal Diffusion MRI. MICCAI (1) 2010: 574-581

Stathis Hadjidemetriou, Colin Studholme, Susanne G. Mueller, Michael Weiner, Norbert Schuff: Restoration of MRI data for intensity non-uniformities using local high order intensity statistics. Medical Image Analysis 13(1): 36-48 (2009)

Benoît Caldairou, François Rousseau, Nicolas Passat, Piotr A. Habas, Colin Studholme, Christian Heinrich: A Non-Local Fuzzy Segmentation Method: Application to Brain MRI. CAIP 2009: 606-613

Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme: A Spatio-temporal Atlas of the Human Fetal Brain with Application to Tissue Segmentation. MICCAI (1) 2009: 289-296

Colin Studholme: Dense feature deformation morphometry: Incorporating DTI data into conventional MRI morphometry. Medical Image Analysis 12(6): 742-751 (2008)

Claudia E. Rodríguez-Carranza, Pratik Mukherjee, Daniel Vigneron, A. James Barkovich, Colin Studholme: A framework for in vivo quantification of regional brain folding in premature neonates. NeuroImage 41(2): 462-478 (2008)

Kio Kim, Mads Hansen, Piotr A. Habas, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme: Intersection based registration of slice stacks to form 3D images of the human fetal brain. ISBI 2008: 1167-1170

Piotr A. Habas, Kio Kim, François Rousseau, Orit A. Glenn, A. James Barkovich, Colin Studholme: Atlas-Based Segmentation of the Germinal Matrix from in Utero Clinical MRI of the Fetal Brain. MICCAI (1) 2008: 351-358

Karl Sjöstrand, Egill Rostrup, C. Ryberg, Rasmus Larsen, Colin Studholme, H. Baezner, J. Ferro, F. Fazekas, Leonardo Pantoni, Domenico Inzitari, Gunhild Waldemar: Sparse Decomposition and Modeling of Anatomical Shape Variation. IEEE Trans. Med. Imaging 26(12): 1625-1635 (2007)

Colin Studholme: Incorporating DTI Data as a Constraint in Deformation Tensor Morphometry Between T1 MR Images. IPMI 2007: 223-232

Colin Studholme, Valerie Cardenas: Population Based Analysis of Directional Information in Serial Deformation Tensor Morphometry. MICCAI (2) 2007: 311-318

Colin Studholme, Corina S. Drapaca, Bistra Iordanova, Valerie Cardenas: Deformation-based mapping of volume change from serial brain MRI in the presence of local tissue contrast change. IEEE Trans. Med. Imaging 25(5): 626-639 (2006)

Claudia E. Rodríguez-Carranza, Pratik Mukherjee, Daniel Vigneron, A. James Barkovich, Colin Studholme: A System for Measuring Regional Surface Folding of the Neonatal Brain from MRI. MICCAI (2) 2006: 201-208

Corina S. Drapaca, Valerie Cardenas, Colin Studholme: Segmentation of tissue boundary evolution from brain MR image sequences using multi-phase level sets. Computer Vision and Image Understanding 100(3): 312-329 (2005)

François Rousseau, Orit A. Glenn, Bistra Iordanova, Claudia E. Rodríguez-Carranza, Daniel Vigneron, A. James Barkovich, Colin Studholme: A Novel Approach to High Resolution Fetal Brain MR Imaging. MICCAI 2005: 548-555

Colin Studholme, Valerie Cardenas: A template free approach to volumetric spatial normalization of brain anatomy. Pattern Recognition Letters 25(10): 1191-1202 (2004)

Colin Studholme, Valerie Cardenas, Enmin Song, Frank Ezekiel, Andrew Maudsley, Michael Weiner: Accurate template-based correction of brain MRI intensity distortion with application to dementia and aging. IEEE Trans. Med. Imaging 23(1): 99-110 (2004)

Colin Studholme, Corina S. Drapaca, Valerie Cardenas, Michael Weiner: Challenges and Progress Toward Quantitative Deformation Morphometry of Gyral Anatomy. ISBI 2004: 599-602

Valerie Cardenas, Colin Studholme: Co-analysis of Maps of Atrophy Rate and Atrophy State in Neurodegeneration. MICCAI (2) 2004: 680-687

A. Ardeshir Goshtasby, Lawrence H. Staib, Colin Studholme, Demetri Terzopoulos: Nonrigid image registration: guest editors' introduction. Computer Vision and Image Understanding 89(2-3): 109-113 (2003)

Colin Studholme: Simultaneous Population Based Image Alignment for Template Free Spatial Normalisation of Brain Anatomy. WBIR 2003: 81-90

Colin Studholme, Valerie Cardenas, Andrew Maudsley, Michael Weiner: An Intensity Consistent Approach to the Cross Sectional Analysis of Deformation Tensor Derived Maps of Brain Shape. MICCAI (1) 2002: 492-499

Oskar M. Skrinjar, Colin Studholme, Arya Nabavi, James S. Duncan: Steps Toward a Stereo-Camera-Guided Biomechanical Model for Brain Shift Compensation. IPMI 2001: 183-189

Colin Studholme, Valerie Cardenas, Norbert Schuff, Howard J. Rosen, Bruce L. Miller, Michael Weiner: Detecting Spatially Consistent Structural Differences in Alzheimer's and Fronto Temporal Dementia Using Deformation Morphometry. MICCAI 2001: 41-48

Colin Studholme, R. Todd Constable, James S. Duncan: Accurate Alignment of Functional EPI Data to Anatomical MRI Using a Physics Based Distortion Model. IEEE Trans. Med. Imaging 19(11): 1115-1127 (2000)

Colin Studholme, Derek L. G. Hill, David J. Hawkes: An overlap invariant entropy measure of 3D medical image alignment. Pattern Recognition 32(1): 71-86 (1999)

Colin Studholme, R. Todd Constable, James S. Duncan: Incorporating an Image Distortion Model in Non-rigid Alignment of EPI with Conventional MRI. IPMI 1999: 454-459

J. Michael Fitzpatrick, Derek L. G. Hill, Yu Shyr, Jay B. West, Colin Studholme, Calvin R. Maurer Jr.: Visual Assessment of the Accuracy of Retrospective Registration of MR and CT Images of the Brain. IEEE Trans. Med. Imaging 17(4): 571-585 (1998)

Daniel Rueckert, Carmel Hayes, Colin Studholme, Paul E. Summers, Martin O. Leach, David J. Hawkes: Non-rigid Registration of Breast MR Images Using Mutual Information. MICCAI 1998: 1144-1152

Colin Studholme, Derek L. G. Hill, David J. Hawkes: Automated 3-D registration of MR and CT images of the head. Medical Image Analysis 1(2): 163-175 (1996)

Colin Studholme, John A. Little, Graeme P. Penney, Derek L. G. Hill, David J. Hawkes: Automated Multimodality Registration Using the Full Affine Transformation: Application to MR and CT Guided Skull Base Surgery. VBC 1996: 601-606

Colin Studholme, Derek L. G. Hill, David J. Hawkes: Automated 3D Registration of Truncated MR and CT Images of the Head. BMVC 1995: 1-10

Lewis D. Griffin, Alan C. F. Colchester, S. A. Röll, Colin Studholme: Hierarchical Segmentation Satisfying Constraints. BMVC 1994: 1-10

Colin Studholme, Derek L. G. Hill, David J. Hawkes: Using Voxel Similarity as a Measure of Medical Image Registration. BMVC 1994: 1-10